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叶 秀彩

Ye, Xiucai

システム情報系 , 准教授
Institute of Systems and Information Engineering , Associate Professor

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  1. 1. Multi-Omics clustering by integrating clinical features from large language model Xiucai Ye; Tianyi Shi; Dong Huang; Tetsuya Sakurai
      Methods (2025)
  2. 2. HMAMP: Designing Highly Potent Antimicrobial Peptides Using a Hypervolume-Driven Multiobjective Deep Generative Model Wang, Li; Liu, Yiping; Fu, Xiangzheng; Ye, Xiucai (+4 著者) Cao, Dongsheng
      JOURNAL OF MEDICINAL CHEMISTRY 68: 8346 (2025)
  3. 3. Spatio-temporal epidemic forecasting using mobility data with LSTM networks and attention mechanism Jiao, Shihu; Wang, Yu; Ye, Xiucai; Nagahara, LarrySakurai., Tetsuya
      Scientific Reports 15: (2025)
  4. 4. OmniClust: A versatile clustering toolkit for single-cell and spatial transcriptomics data Cui, Yaxuan; Cui, Yang; Ding, Yi; Nakai, Kenta (+3 著者) Sakurai, Tetsuya
      Methods 238: 84 (2025)
  5. 5. DRL-UPPS: User Trajectory Privacy Protection Strategy Based on Deep Reinforcement Learning in Mobile Crowdsensing He, Ding; Zhang, Jing; Xu, Li; Liu, YanhuaYe, Xiucai
      IEEE TRANSACTIONS ON COMPUTATIONAL SOCIAL SYSTEMS (2025)
  6. 6. MultiCycPermea: accurate and interpretable prediction of cyclic peptide permeability using a multimodal image-sequence model Wang, Zixu; Chen, Yangyang; Shang, Yifan; Yang, Xiulong (+3 著者) Zeng, Xiangxiang
      BMC Biology 23: (2025)
  7. 7. Image-based generation for molecule design with SketchMol Wang, Zixu; Chen, Yangyang; Ma, Pengsen; Yu, Zhou (+4 著者) Zeng, Xiangxiang
      NATURE MACHINE INTELLIGENCE Epub: (2025)
  8. 8. Robust feature learning using contractive autoencoders for multi-omics clustering in cancer subtyping Guo, Mengke; Ye, Xiucai; Huang, Dong; Sakurai, Tetsuya
      METHODS 233: 52 (2025)
  9. 9. Selecting interpretable features for cancer subtyping on multi-omics data Tianyi Shi; Xiucai Ye; Dong Huang; Tetsuya Sakurai
      2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 1155 (2024) Semantic Scholar
  10. 10. Integrating Biological Language Processing and Memory Attention Model for Protein-DNA Binding Residue Prediction Guan, Shixuan; Ye, Xiucai; Sakurai, Tetsuya
      Proceedings of IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 25 (2024)
  11. 11. Lightweight privacy-preserving authenticated key agreements using physically unclonable functions for internet of drones Lee, Tian-Fu; Ye, Xiucai; Huang, Wei-Jie
      JOURNAL OF INFORMATION SECURITY AND APPLICATIONS 87: (2024) Semantic Scholar
  12. 12. Cancer subtype identification by multi-omics clustering based on interpretable feature and latent subspace learning Shi, Tianyi; Ye, Xiucai; Huang, Dong; Sakurai, Tetsuya
      METHODS 231: 144 (2024) Semantic Scholar
  13. 13. DTS-AdapSTNet: an adaptive spatiotemporal neural networks for traffic prediction with multi-graph fusion Shi, Wenlong; Zhang, Jing; Zhong, Xiangxuan; Chen, XiaopingYe, Xiucai
      PEERJ COMPUTER SCIENCE 10: (2024)
  14. 14. PCDP-CRLPPM: a classified regional location privacy-protection model based on personalized clustering with differential privacy in data management Shi, Wenlong; Zhang, Jing; Chen, Xiaoping; Ye, Xiucai
      The Computer Journal 68: 372 (2024)
  15. 15. An interpretable deep learning model predicts RNA-small molecule binding sites Xi, Wenyu; Wang, Ruheng; Wang, Li; Ye, Xiucai (+1 著者) Sakurai, Tetsuya
      FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE 159: 557 (2024) Semantic Scholar
  16. 16. Identification of Spatial Domains, Spatially Variable Genes, and Genetic Association Studies of Alzheimer Disease with an Autoencoder-based Fuzzy Clustering Algorithm Cui, Yaxuan; Wei, Leyi; Wang, Ruheng; Ye, XiucaiSakurai, Tetsuya
      CURRENT BIOINFORMATICS 19: 765 (2024) Semantic Scholar
  17. 17. DiffSeqMol: A Non-Autoregressive Diffusion-Based Approach for Molecular Sequence Generation and Optimization Wang, Zixu; Chen, Yangyang; Guo, Xiulan; Li, Yayang (+3 著者) Sakurai, Tetsuya
      CURRENT BIOINFORMATICS Epub: (2024) Semantic Scholar
  18. 18. Mapping autophagy-related membrane contact site proteins and complexes with AutoMCS Navigator Liu, Tianyuan; Pan, Xianrun; Ren, Liping; Ye, Xiucai (+1 著者) Zhang, Yang
      AUTOPHAGY Epub: (2024) Semantic Scholar
  19. 19. Stitch-Able Split Learning Assisted Multi-UAV Systems Sun, Tingkai; Wang, Xiaoyan; Ye, Xiucai; Han, Biao
      IEEE OPEN JOURNAL OF THE COMPUTER SOCIETY 5: 418 (2024) Semantic Scholar
  20. 20. IEA-DP: Information Entropy-driven Adaptive Differential Privacy Protection Scheme for social networks Zhang, Jing; Si, Kunliang; Zeng, Zuanyang; Li, TongxinYe, Xiucai
      JOURNAL OF SUPERCOMPUTING 80: 20546 (2024) Semantic Scholar
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