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藤木 涼

FUJIKI, Ryo

生存ダイナミクス研究センター , 助教
Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance (TARA) , Assistant Professor

オープンアクセス版の論文は「つくばリポジトリ」で読むことができます。
  1. 1. 3D-RISM理論を用いた変異型human-ZIP8に関する理論的研究 Ryo FUJIKI; Kowit HENGPHASATPORN; Yasuteru SHIGETA
      Journal of Computer Chemistry, Japan 24: 14 (2025)
  2. 2. Evaluating solubility, stability, and inclusion complexation of oxyresveratrol with various β-cyclodextrin derivatives using advanced computational techniques and experimental validation Saba Ali; Aamir Aman; Kowit Hengphasatporn; Lipika Oopkaew (+9 著者) Thanyada Rungrotmongkol
      Computational Biology and Chemistry 112: 108111 (2024) Semantic Scholar
  3. 3. Why is Dimeric 3D Domain Swapping in Antibody Light Chains Missing from the Solution? Atomistic Insights Mechanisms Lian Duan; Kowit Hengphasatporn; Takahiro Sakai; Ryo Fujiki (+2 著者) Yasuteru Shigeta
      The Journal of Physical Chemistry B 128: 9086 (2024) Semantic Scholar
  4. 4. Structural and thermodynamic insights into antibody light chain tetramer formation through 3D domain swapping Takahiro Sakai; Tsuyoshi Mashima; Naoya Kobayashi; Hideaki Ogata (+6 著者) Shun Hirota
      Nature Communications 14: (2023) Semantic Scholar
  5. 5. Assessment of the applicability of the LFC/3D-RISM-SCF scheme for pKa prediction in methanol solutions Ryo Fujiki; Toru Matsui; Yasuteru Shigeta; Norio YoshidaHaruyuki Nakano
      Chemistry Letters 53: (2023) Semantic Scholar
  6. 6. Structure—yeast α-glucosidase inhibitory activity relationship of 9-O-berberrubine carboxylates Duy Vu Nguyen; Kowit Hengphasatporn; Ade Danova; Aphinya Suroengrit (+4 著者) Warinthorn Chavasiri
      Scientific Reports 13: (2023) Semantic Scholar
  7. 7. Computational Analysis of the SARS-CoV-2 RBD–ACE2-Binding Process Based on MD and the 3D-RISM Theory Norio Yoshida; Yutaka Maruyama; Ayori Mitsutake; Akiyoshi Kuroda (+5 著者) Haruyuki Nakano
      Journal of Chemical Information and Modeling 62: 2889 (2022) Semantic Scholar
  8. 8. Recent Developments of Computational Methods for pKa Prediction Based on Electronic Structure Theory with Solvation Models Ryo Fujiki; Toru Matsui; Yasuteru Shigeta; Haruyuki NakanoNorio Yoshida
      J 4: 849 (2021)
  9. 9. A computational scheme of pK values based on the three-dimensional reference interaction site model self-consistent field theory coupled with the linear fitting correction scheme Fujiki, Ryo; Kasai, Yukako; Seno, Yuki; Matsui, Toru (+2 著者) Nakano, Haruyuki
      Physical chemistry chemical physics : PCCP 20: 27272 (2018) Semantic Scholar
  10. 10. A computational scheme of pKa values based on the three-dimensional reference interaction site model self-consistent field theory coupled with the linear fitting correction scheme Ryo Fujiki; Yukako Kasai; Yuki Seno; Toru Matsui (+2 著者) Haruyuki Nakano
      Physical Chemistry Chemical Physics 20: 27272 (2018) Semantic Scholar

書籍等出版物情報はまだありません。

  1. 1. 抗ボツリヌス毒素中和抗体の毒素中和機構解明に向けた結晶構造解析及び分子動力学計算 廣田, 小太郎; 原田, 彩佳; 藤木, 涼; 片平, じゅん; 幸田, 知子; 岩崎, 憲治
    第70回トキシンシンポジウム
  2. 2. 構造情報を基盤とした改変抗体設計に向けた抗ボツリヌス毒素中和抗体の構造解析 廣田 小太郎; 原田 彩佳; 藤木 涼; 片平 じゅん; 幸田, 知子; 岩崎, 憲治
    2024年度TARAセミナー・生理研研究会
  3. 3. 液体の統計力学理論に基づくZIP8のイオン輸送に関する理論的解析 藤木, 涼
    TARA国際シンポジウム2025「計算機による創薬と生物学のパラダイムシフト」
  4. 4. 3D-RISM理論を用いた変異型ZIP8のイオン輸送に関する理論的研究 藤木, 涼; Kowit, Hengphasatporn; 重田, 育照
    凝縮系の理論化学2025
  5. 5. 3D-RISM理論を用いた変異型human-ZIP8に関する理論的研究 藤木, 涼; Kowit, Hengphasatporn; 重田, 育照
    日本コンピュータ化学会2024年秋季年会

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