ホーム > 白木 賢太郎/ Shiraki, Kentaro

白木 賢太郎

Shiraki, Kentaro

数理物質系 , 教授
Institute of Pure and Applied Sciences , Professor

https://sites.google.com/view/shiraki

  1. 1. A Nonequilibrium Simulation Framework for Reproducing Protein Aggregation in All-Atom Molecular Dynamics Simulations IIJIMA, Moe; YOSHIDA, Toya; SHIRAKI, Kentaro; URA, Tomoto
      The Journal of Physical Chemistry B 130: 3314 (2026) Semantic Scholar
  2. 2. Effects of Arginine on Hierarchical Protein Aggregation Nishinami, Suguru; Kihara, Yoshiki; Akuta, Teruo; Shiraki, KentaroArakawa, Tsutomu
      PROTEIN JOURNAL (2026) Semantic Scholar
  3. 3. Arginine can either suppress or promote the aggregation of egg white proteins depending on solution conditions NAKAMURA, Takumi; NOMOTO, Akira; TOMITA, Shunsuke; URA, TomotoSHIRAKI, Kentaro
      International Journal of Biological Macromolecules 349: (2026)
  4. 4. Additive-Based Protein Stabilization for Stress-Prone and Unstable Proteins URA, Tomoto; NAKAMURA, Takumi; IIJIMA, Moe; YOSHIDA, ToyaSHIRAKI, Kentaro
      Protein Expression and Purification 240: (2026) Semantic Scholar
  5. 5. Mechanistic insights into the salting-in effect of divalent cations on proteins: Interactions with carboxyl groups and peptide bonds YOSHIDA, Toya; URA, Tomoto; ARAKAWA, Tsutomu; SHIRAKI, KentaroHIRANO, Atsushi
      Journal of Molecular Liquids (2026)
  6. 6. Mechanism of 1,6-hexanediol-induced protein droplet dissolution: Thermodynamic insights from amino acid solubility ODA, Haruna; URA, Tomoto; ONO, Hideaki; TANAKA, Shinji (+3 著者) HIRANO, Atsushi
      International Journal of Biological Macromolecules 339: (2025)
  7. 7. Differences and Similarities in Protein and Nucleic Acid Structures and Their Biological Interactions ARAKAWA, Tsutomu; OYAMA, Taiji; URA, Tomoto; NISHINAMI, Suguru (+1 著者) AKUTA, Teruo
      CURRENT ISSUES IN MOLECULAR BIOLOGY 47: (2025)
  8. 8. Non-ionic Detergent-Assisted Refolding of Protein from Protein-SDS Complex AKUTA, Teruo; URA, Tomoto; OIKAWA, Takeshi; SHIBATA, Takashi (+1 著者) ARAKAWA, Tsutomu
      The Protein Journal (2025)
  9. 9. Purification of Immunoglobulin A Using Mesoporous Zirconia Particles Coated with Phosphate Kanoh, Shogo; Tabata, Koshiro; Saito, Shinji; Onuma, Erika (+3 著者) Hirano, Atsushi
      ACS APPLIED MATERIALS & INTERFACES 17: 50891 (2025) Semantic Scholar
  10. 10. Amino acid interactions dependent on the polymerization of charged residues and surface properties of monolayers Nomoto, Akira; Shiraki, Kentaro; Minamiki, Tsukuru
      RSC APPLIED INTERFACES 2: 976 (2025) Semantic Scholar
  11. 11. Elucidation of the Mutual Solubility of Amino Acids for the Rational Control of Phase-Separating Sequences Nomoto, Akira; Sugai, Hiroka; Shiraki, Kentaro; Tomita, Shunsuke
      JOURNAL OF PHYSICAL CHEMISTRY B 129: 7099 (2025) Semantic Scholar
  12. 12. Polymer-engineered condensates for enzyme activation URA, Tomoto; YOSHIDA, Toya; MIKAWA, Tsutomu; SHIRAKI, Kentaro
      POLYMER JOURNAL (2025)
  13. 13. Thermal aggregation of immunoglobulin G depending on the charge state of protein-polyelectrolyte complexes Nomoto, Akira; Shiraki, Kentaro
      INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 296: (2025) Semantic Scholar
  14. 14. Analysis of interactions between amino acids and monolayers of charged side chains Nomoto, Akira; Shiraki, Kentaro; Minamiki, Tsukuru
      RSC APPLIED INTERFACES 2: 243 (2025) Semantic Scholar
  15. 15. Thermal aggregation of antibodies depending on the charge state of protein-polyelectrolyte complexes Nomoto, Akira; Shiraki, Kentaro
      PROTEIN SCIENCE 33: 208 (2024)
  16. 16. Monovalent Ion Effect on Liquid-Liquid Phase Separation of Aqueous Polyphosphate-Salt Mixtures Furuki, Tomohiro; Togo, Azusa; Usuda, Hatsuho; Nobeyama, Tomohiro (+1 著者) Shiraki, Kentaro
      JOURNAL OF PHYSICAL CHEMISTRY B 128: 11435 (2024)
  17. 17. The contrasting roles of co-solvents in protein formulations and food products Arakawa, Tsutomu; Tomioka, Yui; Akuta, Teruo; Shiraki, Kentaro
      BIOPHYSICAL CHEMISTRY 312: (2024) Semantic Scholar
  18. 18. Reentrant condensation of a multicomponent cola/milk system induced by polyphosphate Furuki, Tomohiro; Nobeyama, Tomohiro; Suetaka, Shunji; Matsui, Ryokei (+2 著者) Shiraki, Kentaro
      FOOD CHEMISTRY-X 21: (2024) Semantic Scholar
  19. 19. Cationic polyelectrolytes prevent the aggregation of L-lactate dehydrogenase under unstable conditions Yoshida, Toya; Sakakibara, Nanako; Ura, Tomoto; Minamiki, TsukuruShiraki, Kentaro
      INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 257: (2024) Semantic Scholar
  20. 20. Interfacial and intrinsic molecular effects on the phase separation/ transition of heteroprotein condensates Nobeyama, Tomohiro; Yoshida, Toya; Shiraki, Kentaro
      INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 254: (2024) Semantic Scholar
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  1. 1. 相分離生物学の全貌 白木, 賢太郎; 七野, 悠一
    東京化学同人 2020年11月 (ISBN: 9784807913466)
  2. 2. 相分離生物学 白木,賢太郎
    東京化学同人 2019年8月 (ISBN: 9784807909650)
  3. 3. 2015 40TH INTERNATIONAL CONFERENCE ON INFRARED, MILLIMETER AND TERAHERTZ WAVES (IRMMW-THZ) Hattori, Toshiaki; Aoki, Katsuyoshi; Shiraki, Kentaro (担当:分担執筆, 範囲:Terahertz Spectroscopic Study of Ion Effects on Protein Hydration)
    IEEE 2015年 (ISBN: 9781479982721)
  4. 4. 生物科学入門 白木賢太郎
    東京化学同人 2009年12月
  5. 5. SECOND INTERNATIONAL SYMPOSIUM ON ATOMIC TECHNOLOGY Tomita, Shunsuke; Hamada, Hiroyuki; Nagasaki, Yukio; Shiraki, Kentaro (担当:分担執筆, 範囲:Synergistic effect of polyethylene glycol with arginine on the prevention of heat-induced aggregation of lysozyme - art. no. 012022)
    IOP PUBLISHING LTD 2008年1月
  1. 1. 酵素連続反応と連動した液滴の動的挙動 浦, 朋人; 冨田, 峻介; 白木, 賢太郎
    第44回日本分子生物学会年会 ワークショップ 液-液相分離の酵素連続反応に対する効果 2021年12月1日
  2. 2. 酵素反応と連動した液滴の動的挙動 浦, 朋人; 冨田, 峻介; 白木, 賢太郎
    第94回日本生化学大会 シンポジウム 相分離メガネを通して見た酵素の機能 2021年11月5日
  3. 3. 液滴によるL-乳酸酸化酵素の活性化 浦, 朋人; 香川, 亜子; 八木, 宏昌; 栃尾, 尚哉; 木川, 隆則; 美川, 務; 白木, 賢太郎
    第21回日本蛋白質科学会年会 ワークショップ タンパク質の液液相分離―計測、制御、応用 2021年6月17日
  4. 4. 酵素連続反応と液–液相分離 浦, 朋人; 白木, 賢太郎
    第6回蛋白質工学研究会ワークショップ 蛋白質医薬における相分離現象の理解と産業利用可能性 2020年9月4日
  5. 5. Fractal dimension, persistent homology dimension, and fractal dynamics in the terahertz region: the case of protein lysozyme Mori, Tatsuya; Fujii, Yasuhiro; Kitani, Suguru; Yamamoto, Yohei; Shiraki, Kentaro; Koreeda, Akitoshi; Kojima, Seiji
    Materials Research Meeting 2019 (MRM 2019) 2019年12月10日
  6. 6. Fractal dimension, persistent homology dimension, and fractal dynamics in the terahertz region: the case of protein lysozyme Mori, Tatsuya; Fujii, Yasuhiro; Kitani, Suguru; Yamamoto, Yohei; Shiraki, Kentaro; Koreeda, Akitoshi; Kojima, Seiji
    Materials Research Meeting 2019 (MRM 2019) 2019年12月10日
  7. 7. Terahertz Spectroscopy on Myoglobin: Boson Peak and Fracton Mori, Tatsuya; Motoji, Leona; Fujii, Yasuhiro; Kitani, Suguru; Koreeda, Akitoshi; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    IRMMW-THz 2019 (44th International Conference on Infrared, Millimeter and Terahertz Waves) 2019年9月1日
  8. 8. Terahertz Spectroscopy on Myoglobin: Boson Peak and Fracton Mori, Tatsuya; Motoji, Leona; Fujii, Yasuhiro; Kitani, Suguru; Koreeda, Akitoshi; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    IRMMW-THz 2019 (44th International Conference on Infrared, Millimeter and Terahertz Waves) 2019年9月1日
  9. 9. Terahertz Spectroscopic Study on Protein Myoglobin: Polymer-Like Behavior of Vibrational Density of States Motoji, Leona; Mori, Tatsuya; Fujii, Yasuhiro; Koreeda, Akitoshi; Jiang, Yue; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    APS March Meeting 2019 2019年3月4日
  10. 10. Terahertz time-domain spectroscopy of lyophilized protein lysozyme Mori, Tatsuya; Fujii, Yasuhiro; Jiang, Yue; Motoji, Leona; Kitani, Suguru; Koreeda, Akitoshi; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    TGSW2018 (Tsukuba Global Science Week 2018) 2018年9月20日
  11. 11. Hydration of aqueous polymers investigated by terahertz spectroscopy and principal component analysis Aoki, Katsuyoshi; Hata, Ryusuke; Kaneyasu, Junya F; Schwaab, Gerhard; Shiraki, Kentaro; Hattori, Toshiaki
    2018 43rd International Conference on Infrared, Millimeter and Terahertz Waves 2018年9月9日
  12. 12. Detection of Boson Peak and Fractal Dynamics of Protein by Terahertz Time-Domain Spectroscopy Mori, Tatsuya; Jiang, Yue; Fujii, Yasuhiro; Kitani, Suguru; Koreeda, Akitoshi; Motoji, Leona; Terao, Wakana; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    43rd International Conference on Infrared, Millimeter, and Terahertz Waves (IRMMW-THz) 2018年9月9日
  13. 13. Terahertz Time-Domain Spectroscopy of Protein Myoglobin: Detection of Boson Peak and Fracton Motoji, Leona; Mori, Tatsuya; Fujii, Yasuhiro; Koreeda, Akitoshi; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    43rd International Conference on Infrared, Millimeter, and Terahertz Waves (IRMMW-THz) 2018年9月9日
  14. 14. 液-液相分離と酵素連続反応 浦, 朋人; 白木, 賢太郎
    第1回LLPS研究会 2018年8月31日
  15. 15. Detection of fractal dynamics of protein by terahertz spectroscopy Mori, Tatsuya; Fujii, Yasuhiro; Jiang, Yue; Motoji, Leona; Terao, Wakana; Kitani, Suguru; Koreeda, Akitoshi; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    EUCMOS 2018 (XXXIV EUROPEAN CONGRESS ON MOLECULAR SPECTROSCOPY) 2018年8月19日
  16. 16. Ultrafast Vibrational Energy Transfer from Photoexcited Carbon Nanotubes to Proteins Nakayama, Tomohito; Yoshizawa, Shunsuke; Hirano, Atsushi; Tanaka, Takeshi; Shiraki, Kentaro; Hase, Muneaki
    21st International Conference on Ultrafast Phenomena (UP) 2018年7月15日 Optical Society of America
  17. 17. テラヘルツ時間領域分光によるタンパク質リゾチームのボゾンピークとフラクトンの検出 森, 龍也; 姜, 越; 藤井, 康裕; 気谷, 卓; 吉澤, 俊祐; 泉二, 玲緒奈; 白木, 賢太郎; 山本, 洋平; 是枝, 聡肇; 小島, 誠治
    日本物理学会 第73回年次大会 (2018年) 2018年3月22日
  18. 18. カーボンナノチューブ - 蛋白質複合体内の超高速振動エネルギー移動 中山, 智仁; 吉澤俊祐; 平野, 篤; 田中, 丈士; 白木, 賢太郎; 長谷, 宗明
    2018年第65回応用物理学会春季学術講演会 2018年3月17日 応用物理学会
  19. 19. A Study of Boson Peak and Fracton in Protein Lysozyme by Terahertz Time-domain Spectroscopy Jiang, Yue; Mori, Tatsuya; Fujii, Yasuhiro; Kitani, Suguru; Yoshizawa, Shunsuke; Motoji, Leona; Shiraki, Kentaro; Yamamoto, Yohei; Koreeda, Akitoshi; Kojima, Seiji
    APS March Meeting 2018 2018年3月5日
  20. 20. Boson peak and facton behavior of lysozyme Jiang, Yue; Mori, Tatsuya; Fujii, Yasuhiro; Motoji, Leona; Yoshizawa, Shunsuke; Koreeda, Akitoshi; Shiraki, Kentaro; Yamamoto, Yohei; Kojima, Seiji
    TGSW-IWP2017 (TGSW-Interdisciplinary Workshop on Science and Patents 2017) 2017年9月26日
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