ホーム > 尾崎 遼/ Ozaki, Haruka

尾崎 遼

Ozaki, Haruka

医学医療系 , 准教授

https://sites.google.com/view/ozakilab-jp

オープンアクセス版の論文は「つくばリポジトリ」で読むことができます。
  1. 1. Neuronal subtype-specific transcriptomic changes in the cerebral neocortex associated with sleep pressure. Shinya Nakata; Kanako Iwasaki; Hiromasa Funato; Masashi YanagisawaHaruka Ozaki
      Neuroscience research (2024) Semantic Scholar
  2. 2. DNA hypomethylation characterizes genes encoding tissue-dominant functional proteins in liver and skeletal muscle Hideki Maehara; Toshiya Kokaji; Atsushi Hatano; Yutaka Suzuki (+16 著者) Shinya Kuroda
      Scientific Reports 13: (2023) Semantic Scholar
  3. 3. Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans. Saeko Tahara; Takaho Tsuchiya; Hirotaka Matsumoto; Haruka Ozaki
      BMC genomics 24: 597 - 597 (2023) Semantic Scholar
  4. 4. LLMs can generate robotic scripts from goal-oriented instructions in biological laboratory automation Takashi Inagaki; Akari Kato; Koichi Takahashi; Haruka OzakiGenki N. Kanda
      (2023)
  5. 5. Automation of yeast spot assays using an affordable liquid handling robot Shodai Taguchi; Yasuyuki Suda; Kenji Irie; Haruka Ozaki
      SLAS Technology (2023)
  6. 6. SAGAS: Simulated annealing and greedy algorithm scheduler for laboratory automation Yuya Arai; Ko Takahashi; Takaaki Horinouchi; Koichi TakahashiHaruka Ozaki
      SLAS Technology (2023) Semantic Scholar
  7. 7. Single-cell transcriptome analysis illuminating the characteristics of species-specific innate immune responses against viral infections Hirofumi Aso; Jumpei Ito; Haruka Ozaki; Yukie Kashima (+2 著者) Kei Sato
      GigaScience (2022)
  8. 8. Identifying potential regulators of JAGGED1 expression in portal mesenchymal cells Teppei Nishino; Masaharu Yoshihara; Takahiro Nakayama; Takaho Tsuchiya (+2 著者) Satoru Takahashi
      BMC Research Notes 15: 172 - 172 (2022) Semantic Scholar
  9. 9. In vivo transomic analyses of glucose-responsive metabolism in skeletal muscle reveal core differences between the healthy and obese states Toshiya Kokaji; Miki Eto; Atsushi Hatano; Katsuyuki Yugi (+19 著者) Shinya Kuroda
      Scientific Reports 12: (2022) Semantic Scholar
  10. 10. CCPLS reveals cell-type-specific spatial dependence of transcriptomes in single cells Takaho Tsuchiya; Hiroki Hori; Haruka Ozaki
      Bioinformatics 38: 4868 - 4877 (2022) Semantic Scholar
  11. 11. scGR-seq: Integrated analysis of glycan and RNA in single cells. Haruki Odaka; Haruka Ozaki; Hiroaki Tateno
      STAR protocols 3: 101179 - 101179 (2022) Semantic Scholar
  12. 12. Cell-to-cell interaction analysis of prognostic ligand-receptor pairs in human pancreatic ductal adenocarcinoma Sayaka R. Suzuki; Akihiro Kuno; Haruka Ozaki
      Biochemistry and Biophysics Reports 28: 101126 - 101126 (2021) Semantic Scholar
  13. 13. Integrated analysis of glycan and RNA in single cells Fumi Minoshima; Haruka Ozaki; Haruki Odaka; Hiroaki Tateno
      iScience 24: 102882 - 102882 (2021) Semantic Scholar
  14. 14. Optimal Scheduling for Laboratory Automation of Life Science Experiments with Time Constraints Takeshi D. Itoh; Takaaki Horinouchi; Hiroki Uchida; Koichi TakahashiHaruka Ozaki
      SLAS TECHNOLOGY: Translating Life Sciences Innovation 24726303211021790 - 24726303211021790 (2021) Semantic Scholar
  15. 15. Trans-omic analysis reveals obesity-associated dysregulation of inter-organ metabolic cycles between the liver and skeletal muscle. Riku Egami; Toshiya Kokaji; Atsushi Hatano; Katsuyuki Yugi (+19 著者) Shinya Kuroda
      iScience 24: 102217 - 102217 (2021) Semantic Scholar
  16. 16. MotiMul: A significant discriminative sequence motif discovery algorithm with multiple testing correction Koichi Mori; Haruka Ozaki; Tsukasa Fukunaga
      Proceedings - 2020 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2020 186 - 193 (2020) Semantic Scholar
  17. 17. Millefy: visualizing cell-to-cell heterogeneity in read coverage of single-cell RNA sequencing datasets Haruka Ozaki; Tetsutaro Hayashi; Mana Umeda; Itoshi Nikaido
      BMC Genomics 21: (2020) Semantic Scholar
  18. 18. Transomics analysis reveals allosteric and gene regulation axes for altered hepatic glucose-responsive metabolism in obesity. Toshiya Kokaji; Atsushi Hatano; Yuki Ito; Katsuyuki Yugi (+19 著者) Shinya Kuroda
      Science signaling 13: (2020) Semantic Scholar
  19. 19. Stability of RNA sequences derived from the coronavirus genome in human cells. Hiroyasu Wakida; Kentaro Kawata; Yuta Yamaji; Emi Hattori (+3 著者) Nobuyoshi Akimitsu
      Biochemical and biophysical research communications 527: 993 - 999 (2020) Semantic Scholar
  20. 20. An NMF-based approach to discover overlooked differentially expressed gene regions from single-cell RNA-seq data
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      NAR Genomics and Bioinformatics (2020) Semantic Scholar
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書籍等出版物情報はまだありません。

  1. 1. Millefy によるリードカバレージの細胞間不均一性の可視化 尾崎 遼
    シングルセルゲノミクス研究会2019 2019年8月30日 招待有り
  2. 2. シングルセルRNAシーケンス解析から考える環境DNA研究の展望 尾崎 遼
    日本生態学会 第66回大会 2019年3月19日 招待有り
  3. 3. Inferring activity and targets of enhancers in single cells through single-cell enhancer RNA analyses 尾崎 遼
    International Workshop for Systems Genetics 2018 2018年11月19日 招待有り
  4. 4. シングルセル・インフォマティクスによる細胞機能の理解 尾崎 遼
    名古屋大学創薬科学研究科主催 第85回創薬科学セミナー 2018年9月25日
  5. 5. （サイトメトリー研究者のための)１細胞オミクス計測データ解析のフロンティア 尾崎 遼
    第28回日本サイトメトリー学会学術集会 2018年5月27日 招待有り

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