ホーム > 重田 育照/ Shigeta, Yasuteru
重田 育照
Shigeta, Yasuteru
計算科学研究センター , 教授 Center for Computational Sciences , Professor
http://www2.ccs.tsukuba.ac.jp/public/shigeta/shigeta_HP/Top_page.html
http://www2.ccs.tsukuba.ac.jp/people/shigeta/shigeta_personal/Message.html
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ISSM best paper
2024-12-10
上殿 明良 蓮沼 隆 重田 育照
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可逆性小児急性肝不全の発症機序の解明-治療薬開発に向けた道筋-
2023-12-27
重田 育照
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量子生命科学会第4回大会 優秀ポスター賞
2022-05-27
庄司 光男 堀 優太 重田 育照
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凝集したタンパク質を元に戻す分子Hsp104 の構造を解明
2021-05-11
重田 育照
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スーパーコンピュータを活用して「効く薬の候補」を素早く見つけ出す | 重田 育照
2021-04-01
重田 育照 広川 貴次 原田 隆平
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1兆分の1秒の時間分解能で液晶分子の動画を観測 -新しい測定・解析手法の確立
2018-02-13
重田 育照
オープンアクセス版の論文は「つくばリポジトリ」で読むことができます。
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1.
Enantioselective interactions of aminonitrile dimers
Natsuki Watanabe; Yu Komatsu; Koichi Miyagawa; Yuta Hori (+1 著者) Mitsuo Shoji
Physical Chemistry Chemical Physics (2025) Semantic Scholar
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2.
Rationally designed antimicrobial peptides with high selectivity and efficiency against phytopathogenic Ralstonia solanecearum
Melvalia Cristin Manik; Nitchakan Darai; Thanyada Rungrotmongkol; Lian Duan (+3 著者) Alisa S. Vangnai
Science of The Total Environment 976: 179354 (2025)
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3.
Structure and catalytic activity of a dihydrofolate reductase-like enzyme from Leptospira interrogans
Chandit, Charin; Hengphasatporn, Kowi; Donsuy, Pattraporn; Shigeta, YasuteruWangkanont, Kittikhun
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 298: (2025)
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4.
Exploring mimosamycin as a Janus kinase 2 inhibitor: A combined computational and experimental investigation
Sanachai, Kamonpan; Hengphasatporn, Kowi; Chamni, Supakarn; Suwanborirux, Khani (+5 著者) Thanyada
COMPUTATIONAL BIOLOGY AND CHEMISTRY 115: (2025)
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5.
Pseudo[3]rotaxane and [3]Rotaxane of Per(5-carboxy-5-dehydroxymethyl)-Cyclodextrins Utilizing Carboxylic Acid Dimer as Recognition Units
Nakamura, Takashi; Kuwabara, Masamune; Zhang, Haoyang; Okazawa, Kazuki (+2 著者) Nabeshima, Tatsuya
The Journal of Organic Chemistry 90: 3603 (2025)
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6.
Apoprotein Intermolecular Interactions and Heme Insertion for 3D Domain Swapping in Myoglobin
Gissi Novientri; Koji Takeda; Lian Duan; Kowit Hengphasatporn (+3 著者) Shun Hirota
ACS Omega (2025)
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7.
Characterization of Delta-7 Alkenone Desaturase in Haptophyte Gephyrocapsa huxleyi Through Heterologous Expression in Tisochrysis lutea
Yoneda, Kohei; Kobayashi, Chinatsu; Araie, Hiroya; Morita, Rikuri (+4 著者) Suzuki, Iwane
MARINE BIOTECHNOLOGY 27: (2025)
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8.
Rational Design and Engineering of Conducting Polymers for Chemical Enhancement in Raman Scattering
Huanhuan Zhang; Jun Yu Dong; Xuke Tang; Naoki Kishimoto (+16 著者) Keisuke Goda
Advanced Optical Materials (2025)
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9.
Polysulfur-based bulking of dynamin-related protein 1 prevents ischemic sulfide catabolism and heart failure in mice
Nishimura, Akiyuki; Ogata, Seiryo; Tang, Xiaokang; Hengphasatporn, Kowi (+11 著者) Nishida, Motohiro
NATURE COMMUNICATIONS 16: 276 (2025)
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10.
Theoretical investigation of sustainable CO2 electroreduction to high-value products utilizing N-doped/BN-modified Triphenylene-Graphdiyne catalysts
Sirilak Kongkaew; Manussada Ratanasak; Yasuteru Shigeta; Jun-ya HasegawaVudhichai Parasuk
Fuel (2025) Semantic Scholar
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11.
Experimental and Computational Studies on Domain-Swapped Structure Stabilization of an Antibody Light Chain by Disulfide Bond Introduction.
Wahyu Fitriana; Takahiro Sakai; Lian Duan; Kowit Hengphasatporn (+4 著者) Shun Hirota
Journal of medicinal chemistry 67: 22313 (2024)
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12.
Structural Fluctuation in Homodimeric Aminoacyl-tRNA Synthetases Induces Half-of-the-Sites Activity
Yoshino Okamoto; Takunori Yasuda; Rikuri Morita; Yasuteru ShigetaRyuhei Harada
The Journal of Physical Chemistry B (2024) Semantic Scholar
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13.
GPNMB is a novel binding partner of FGFR1 that affects tumorigenic potential through AKT phosphorylation in TNBC
Elhinnawi; Manar A.; Okita, Yukari; Shigematsu, Katsunobu (+6 著者) Kato, Mitsuyasu
CANCER SCIENCE Epub: (2024) Semantic Scholar
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14.
Design, Synthesis, and Biological Evaluation of Darunavir Analogs as HIV-1 Protease Inhibitors
Muhammad Asad Ur Rehman; Hathaichanok Chuntakaruk; Soraat Amphan; Aphinya Suroengrit (+6 著者) Tanatorn Khotavivattana
ACS Bio & Med Chem Au (2024)
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15.
BEMM-GEN: A Toolkit for Generating a Biomolecular Environment-Mimicking Model for Molecular Dynamics Simulation
Takunori Yasuda; Rikuri Morita; Yasuteru Shigeta; Ryuhei Harada
Journal of Chemical Information and Modeling (2024) Semantic Scholar
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16.
Evaluating solubility, stability, and inclusion complexation of oxyresveratrol with various β-cyclodextrin derivatives using advanced computational techniques and experimental validation
Ali, Saba; Aman, Aamir; Hengphasatporn, Kowi; Oopkaew, Lipika (+10 著者) Thanyada
COMPUTATIONAL BIOLOGY AND CHEMISTRY 112: (2024) Semantic Scholar
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17.
Why is Dimeric 3D Domain Swapping in Antibody Light Chains Missing from the Solution? Atomistic Insights Mechanisms
Lian Duan; Kowit Hengphasatporn; Takahiro Sakai; Ryo Fujiki (+2 著者) Yasuteru Shigeta
The Journal of Physical Chemistry B (2024) Semantic Scholar
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18.
Rational Design of Cyclopentadiene-Based Super- and Hyperacids Based on Aromaticity
Mrinal Kanti Si; Yasuteru Shigeta
The Journal of Physical Chemistry A (2024) Semantic Scholar
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19.
A machine learning potential construction based on radial distribution function sampling
Natsuki Watanabe; Yuta Hori; Hiroki Sugisawa; Tomonori Ida (+1 著者) Yasuteru Shigeta
Journal of Computational Chemistry (2024) Semantic Scholar
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20.
Machine learning-based QSAR and LB-PaCS-MD guided design of SARS-CoV-2 main protease inhibitors
Toopradab, Borwornlak; Xie, Wanting; Duan, Lian; Hengphasatporn, Kowi (+6 著者) Thanyada
Bioorganic & medicinal chemistry letters 110: (2024) Semantic Scholar
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1.
Hydrogenomics: The Science of Fully Utilizing Hydrogen
Hori, Yuta; Nishikawa, Koji; Shigeta, Yasuteru; Higuchi, Yoshiki
共立出版 2023年4月
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2.
Recent advances of the fragment molecular orbital method Subtitle: Enhanced performance and applicability
Shigeta, Yasuteru
(担当:分担執筆, 範囲:AnalysisFMO toolkit: PyMOL plugin module to 3D-visualize interaction energies in protein (3D-VIEP) generated by fragment molecular orbital calculation)
Springer 2021年1月 (ISBN: 9789811592355)
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3.
Recent advances of the fragment molecular orbital method Subtitle: Enhanced performance and applicability
Shigeta, Yasuteru
(担当:分担執筆, 範囲:AnalysisFMO toolkit: PyMOL plugin module to 3D-visualize interaction energies in protein (3D-VIEP) generated by fragment molecular orbital calculation)
Springer 2021年1月 (ISBN: 9789811592355)
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4.
Advances in Quantum Chemistry
Shigeta, Yasuteru; Harada, Ryuhei
(担当:分担執筆, 範囲:Parallel Cascade Selection Molecular Dynamics Simulations for Transition Pathway Sampling of Biomolecules)
2019年1月
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5.
Quantum Systems in Physics, Chemistry, and Biology: Advances in Concepts and Applications
Baba, Takeshi; Kamiya, Katsumasa; Shigeta, Yasuteru
(担当:分担執筆, 範囲:Integrated Computational Studies on Mutational Effects of A Nylon-degrading Enzyme)
2017年6月 (ISBN: 9783319502540)
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6.
Reference modules in Materials Science and Engineering 2016
Harada, Ryuhei; Inagaki, Yuji; Shigeta, Yasuteru
(担当:分担執筆, 範囲:Protein Folding and Evolution)
2016年6月
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7.
金属錯体の量子・計算化学
重田,育照; 北河康隆
(担当:分担執筆, 範囲:第4-1章 錯体の伝導性)
2014年10月
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8.
Quantum mechanics Chap. 17
Shigeta,Yasuteru
(担当:分担執筆, 範囲:Quantal Cumulant Mechanics as Extended Ehrenfest Theorem)
InTech open 2013年4月
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9.
Conceptual and Computational Advances in Quantum Chemistry, Chap. 25
Shigeta,Yasuteru
(担当:分担執筆, 範囲:Theoretical Studies on Metal-Containing Artificial DNA Bases”, Advances in the Theory of Atomic and Molecular Systems)
Springer 2012年10月
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10.
Advances in the Theory of Atomic and Molecular Systems, Conceptual and Computational Advances in Quantum Chemistry, Chap. 21
Shigeta,Yasuteru
(担当:分担執筆, 範囲:Quantum Theory in Terms of Cumulant Variables)
Springer 2009年10月
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11.
ADVANCES IN THE THEORY OF ATOMIC AND MOLECULAR SYSTEMS: DYNAMICS, SPECTROSCOPY, CLUSTERS, AND NANOSTRUCTURES
Shigeta, Yasuteru; Miyachi, Hideaki; Matsui, Toru; Yokoyama, Norisuke; Hirao, Kimihiko
(担当:分担執筆, 範囲:Quantum Theory in Terms of Cumulant Variables)
SPRINGER 2009年1月 (ISBN: 9789048129843)
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12.
Challenges and Advances in Computational Chemistry and Physics, Chap. 2
Shigeta,Yasuteru
(担当:分担執筆, 範囲:Single-Reference Methods for Excited States in Molecules and Polymers)
Springer 2008年10月
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13.
物性量子化学入門
重田,育照
(担当:分担執筆, 範囲:第13、14章)
講談社 2004年9月
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101.
生物学的レアイベントを再現予測するタンパク質構造サンプリング手法の開発
原田, 隆平; 重田, 育照
日本物理学会2018年春季大会 2018年3月23日
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102.
QM/MM Studies of the Reaction Mechanisms of Metalloenzymes
Kayanuma, Megumi; Shoji, Mitsuo; Shigeta, Yasuteru
International Congress on Pure & Applied Chemistry 2018 2018年3月7日 招待有り
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103.
3重項消光アップコンバージョンの理論解析と物質設計
重田,育照
スーパーコンピュータワークショップ2017「機能性材料設計への最新の計算科学アプローチ」 2018年1月23日 招待有り
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104.
Theoretical Analyses on Triplet-triplet Annihilation Processes of 9,10-diphenylanthracene and derivatives in solution
Shigeta, Yasuteru
8th Asia-Pacific Conference of Theoretical and Computational Chemistry (APCTCC 8) 2017年12月15日 招待有り
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105.
Surface Hopping Simulation on the Photodissociation of Methanol
Megumi, Kayanuma; Mitsuo, Shoji; Yuri, Aikawa; Masayuki, Umemura; Yasuteru, Shigeta
CPMD2017 Workshop 2017年10月18日
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106.
An Enhanced Sampling Method for Searching Conformational Changes of Proteins and Supramolecules
Shigeta, Yasuteru
22nd International Workshop on Quantum Systems in Chemistry, Physics and Biology (QSCP-XXII) 2017年10月16日 招待有り
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107.
Parallel Cascade Selection Molecular Dynamics Simulations for Transition Pathway Sampling of Biomolecules
Harada, Ryuhei; Shigeta, Yasuteru
22nd International Workshop on Quantum Systems in Chemistry, Physics, and Biology (QSCP) 2017年10月16日
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108.
Computational Studies on Tautmerism in Protein Environment
重田, 育照
第55回生物物理学会シンポジウム「タンパク質科学におけるケトエノール異性」 2017年9月19日 招待有り
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109.
Triplet-triplet Annihilation Processes of 9,10-diphenylanthracene and derivatives in solution
Shigeta, Yasuteru
The 9th Conference of the Asian Consortium on Computational Materials Science 2017年8月8日 招待有り
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110.
Theoretical study on the photodissociation of methanol in the interstellar medium
Kayanuma, Megumi; Shoji, Mitsuo; Aikawa, Yuri; Shigeta, Yasuteru; Umemura, Masayuki
The 28th International Conference on Photochemistry (ICP2017) 2017年7月16日
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111.
Simple conformational search methods for understanding biological functions
Shigeta,Yasuteru
10th China-Japan Joint Symposium on Functional Supramolecular Architecture 2017年5月14日 招待有り
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112.
Refractive indices of organo-metallic and -metalloid compounds: A long-range corrected DFT study
Shigeta,Yasuteru
9th Asian Photochemistry Conference 2016年12月4日
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113.
Intramolecular Stereodynamic Effects on Ketene-Olefin [2 + 2] Cycloadditions of 2,4-Pentanediol Tether
Shigeta,Yasuteru
Stereodynamics 2016 2016年11月6日
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114.
Cumulant Mechanics for Quantum and Statistical Physics
Shigeta, Yasuteru
The 4th International Conference on Molecular Simulation (ICMS) 2016年10月23日 招待有り
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115.
Integrated approach toward rational design of enzyme
Shigeta, Yasuteru
Japan-Thai workshop on theoretical and computational chemistry 2016年9月21日 招待有り
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116.
Simple conformational search methods for understanding biological functions
Shigeta,Yasuteru
Shanghai Workshop on Frontiers in Molecular Biophysics 2016年7月23日 招待有り
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117.
Efficient Conformational Search Methods for Protein Folding Problems
Shigeta, Yasuteru
The nineth Congress of the International Society for Theoretical Chemical Physics (ISTCP 2016) 2016年7月17日
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118.
A consistent scheme for accurately estimating acid dissociation constant (pKa) and redox potential
Shigeta,Yasuteru
4th Changsha Workshop on Theoretical and Computational Chemistry 2016 2016年6月10日 招待有り
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119.
Dynamical Interaction Analysis of Protein Interaction by Machine Learning Method
SHIGETA, Yasuteru
International Symposium on Computational Molecular Science and Machine Learning 招待有り
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120.
Theoretical investigations on singlet fission and triplet-triplet annihilation up-conversion
SHIGETA, Yasuteru
2024 International Symposium on Quantum Dynamics of Complex Systems 招待有り
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1. 15/228,873: Information Processing Apparatus and Simulation Method
重田, 育照 -
2. 15/228,540: Information Processing Apparatus and Simulation Method
重田,育照 -
3. 2015-156703: 情報処理装置、指標次元抽出方法、および指標次元抽出プログラム
重田,育照 -
4. 2015-156702: 情報処理装置、シミュレーション方法、およびシミュレーションプログ 2. ラム
重田,育照 -
5. 2015-032321: 情報処理、シミュレーションプログラムおよびシミュレーション方法
重田,育照
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